PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0001s0272.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 214aa    MW: 24106.8 Da    PI: 8.3687
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0001s0272.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1023.4e-32129187159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+++r ++d+ vv++tYeg H h+
  Kalax.0001s0272.1.p 129 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQIQRVSKDEGVVITTYEGFHSHP 187
                          59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-33114188IPR003657WRKY domain
SuperFamilySSF1182907.06E-29121188IPR003657WRKY domain
PROSITE profilePS5081129.539124189IPR003657WRKY domain
SMARTSM007741.7E-37129188IPR003657WRKY domain
PfamPF031063.1E-26130187IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MFMAFDQISN SASSRHVSLA SIIPVSASES QLFKSHMTTS SMLAPGLMEQ QQQQERGVKR  60
PSLDESSDNN CENNNESGCI DAQSCDSVVG MKQQISNAAA TSDQGVEKEE KKKKKHRYAF  120
QTRSHVDILD DGYRWRKYGQ KAVKNNKFPR SYYRCTHQGC NVKKQIQRVS KDEGVVITTY  180
EGFHSHPTIQ NSSDNFEHIL TQMNIYNNNC SPL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A8e-28119186774Probable WRKY transcription factor 4
1wj2_A8e-28119186774Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010249071.15e-60PREDICTED: probable WRKY transcription factor 75
TrEMBLA0A0B0NRG45e-59A0A0B0NRG4_G
TrEMBLS5CKE72e-58S5CKE7_JATCU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-52WRKY DNA-binding protein 75